Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp54Q8BL06 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp54Q8BL06 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp54Q8BL06 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp54Q8BL06 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp54Q8BL06 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp54Q8BL06 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp54Q8BL06 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Usp54Q8BL06 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp54Q8BL06 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp54Q8BL06 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm16089-201ENSMUST00000117679 336 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm17086-201ENSMUST00000171346 484 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm26731-201ENSMUST00000180683 543 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm28683-201ENSMUST00000187134 615 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm28840-205ENSMUST00000189320 615 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm28835-203ENSMUST00000190062 615 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm17984-201ENSMUST00000205286 859 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm8290-201ENSMUST00000218202 477 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm20287-201ENSMUST00000172848 2367 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm37151-201ENSMUST00000194631 5007 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm45250-201ENSMUST00000209414 3592 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm44604-201ENSMUST00000205475 496 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm45908-201ENSMUST00000212977 1177 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Mir129-1-201ENSMUST00000083535 73 ntBASIC8.18□□□□□ -1.1
Usp54Q8BL06 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp54Q8BL06 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm36947-201ENSMUST00000194709 2249 ntBASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.17□□□□□ -1.1
Usp54Q8BL06 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp54Q8BL06 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm45520-201ENSMUST00000210109 2031 ntBASIC8.17□□□□□ -1.1
Usp54Q8BL06 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Usp54Q8BL06 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm15754-201ENSMUST00000119191 478 ntBASIC8.17□□□□□ -1.1
Usp54Q8BL06 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm12026-201ENSMUST00000120961 1024 ntBASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm25962-201ENSMUST00000157173 168 ntBASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm25383-201ENSMUST00000157810 144 ntBASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm23945-201ENSMUST00000179609 92 ntBASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm27754-201ENSMUST00000183340 126 ntBASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm5334-201ENSMUST00000187472 720 ntBASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm18800-202ENSMUST00000188688 1105 ntBASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm18541-201ENSMUST00000215935 538 ntBASIC8.17□□□□□ -1.1
Usp54Q8BL06 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp54Q8BL06 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp54Q8BL06 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Gm17791-201ENSMUST00000185660 1501 ntBASIC8.16□□□□□ -1.1
Usp54Q8BL06 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Gm11743-201ENSMUST00000117385 1735 ntBASIC8.16□□□□□ -1.1
Usp54Q8BL06 AC124421.1-201ENSMUST00000219114 4154 ntBASIC8.16□□□□□ -1.1
Usp54Q8BL06 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC8.16□□□□□ -1.1
Usp54Q8BL06 Gm8256-201ENSMUST00000169178 453 ntBASIC8.16□□□□□ -1.1
Usp54Q8BL06 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Gm18904-201ENSMUST00000218756 329 ntBASIC8.16□□□□□ -1.1
Usp54Q8BL06 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp54Q8BL06 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms