Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm8032-201ENSMUST00000171009 574 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm24561-201ENSMUST00000175182 95 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm23379-201ENSMUST00000180026 107 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Mir6951-201ENSMUST00000183910 75 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm8403-201ENSMUST00000189712 1298 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm37946-201ENSMUST00000192064 347 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm38019-201ENSMUST00000195133 380 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm43096-201ENSMUST00000196173 421 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm42580-201ENSMUST00000197223 753 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm10221-201ENSMUST00000088299 309 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm7754-201ENSMUST00000223075 2064 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm43537-201ENSMUST00000199064 3110 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm15021-201ENSMUST00000117832 742 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm6427-201ENSMUST00000118721 979 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm11581-201ENSMUST00000122024 763 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm24517-201ENSMUST00000122560 107 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm3339-201ENSMUST00000163462 475 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm4373-201ENSMUST00000178571 556 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm27360-201ENSMUST00000183487 80 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm18406-201ENSMUST00000185872 669 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm28700-201ENSMUST00000187614 579 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm28801-201ENSMUST00000188761 449 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm38097-201ENSMUST00000192936 439 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm37526-201ENSMUST00000194640 619 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm43505-201ENSMUST00000200579 139 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Pcdh19Q80TF3 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms