Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm25311-201ENSMUST00000104136 132 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm13811-201ENSMUST00000117800 256 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm15310-201ENSMUST00000117891 372 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm11227-201ENSMUST00000119774 471 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm11370-201ENSMUST00000120583 260 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm14369-201ENSMUST00000121355 285 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm13221-201ENSMUST00000121712 430 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm25782-201ENSMUST00000122526 289 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm24383-201ENSMUST00000122691 333 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm15274-201ENSMUST00000131442 291 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm21979-201ENSMUST00000139887 291 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm15259-201ENSMUST00000151262 291 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm23115-201ENSMUST00000158480 108 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Mirt2-201ENSMUST00000175179 285 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm27014-201ENSMUST00000182658 937 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm29156-201ENSMUST00000187764 499 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm29605-201ENSMUST00000190800 292 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm18348-201ENSMUST00000191227 820 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm38330-201ENSMUST00000192743 959 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm43779-201ENSMUST00000196691 829 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm9317-201ENSMUST00000197055 862 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm17822-201ENSMUST00000204307 351 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm43974-201ENSMUST00000205080 684 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm18205-201ENSMUST00000209215 841 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm6436-201ENSMUST00000077163 451 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm18300-201ENSMUST00000192792 1406 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.41□□□□□ -1.38
CtifQ6PEE2 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CtifQ6PEE2 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CtifQ6PEE2 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CtifQ6PEE2 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.4□□□□□ -1.38
CtifQ6PEE2 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.4□□□□□ -1.38
CtifQ6PEE2 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.4□□□□□ -1.38
CtifQ6PEE2 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
CtifQ6PEE2 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.4□□□□□ -1.38
CtifQ6PEE2 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CtifQ6PEE2 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.4□□□□□ -1.38
CtifQ6PEE2 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.4□□□□□ -1.38
CtifQ6PEE2 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CtifQ6PEE2 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CtifQ6PEE2 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CtifQ6PEE2 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CtifQ6PEE2 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
CtifQ6PEE2 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms