Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm2058-201ENSMUST00000178791 560 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm18427-201ENSMUST00000195422 515 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm43779-201ENSMUST00000196691 829 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm19900-201ENSMUST00000207285 576 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm6068-201ENSMUST00000222270 387 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm5830-201ENSMUST00000049117 443 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.21□□□□□ -1.41
Upf3bQ3ULL6 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.21□□□□□ -1.41
Upf3bQ3ULL6 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Upf3bQ3ULL6 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm15660-201ENSMUST00000118997 478 ntBASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm11848-201ENSMUST00000121207 973 ntBASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm8761-201ENSMUST00000121507 955 ntBASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm25439-201ENSMUST00000158280 131 ntBASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm2539-203ENSMUST00000181352 746 ntBASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm2040-201ENSMUST00000202979 289 ntBASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm44108-201ENSMUST00000203525 422 ntBASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm44162-201ENSMUST00000203543 544 ntBASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Upf3bQ3ULL6 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm22492-201ENSMUST00000157192 297 ntBASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm24303-201ENSMUST00000178237 126 ntBASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm27460-201ENSMUST00000184213 100 ntBASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm29745-201ENSMUST00000198005 687 ntBASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Upf3bQ3ULL6 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 133.3 ms