Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Usp39Q3TIX9 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Usp39Q3TIX9 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Usp39Q3TIX9 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm23979-201ENSMUST00000104071 128 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm26422-201ENSMUST00000104276 132 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm12842-201ENSMUST00000117298 476 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm16421-201ENSMUST00000117616 1557 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm12040-201ENSMUST00000118357 537 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm13772-201ENSMUST00000118431 317 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm14463-201ENSMUST00000121117 498 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm6067-201ENSMUST00000121648 491 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm24383-201ENSMUST00000122691 333 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm14747-201ENSMUST00000149888 984 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm5583-201ENSMUST00000174328 1519 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm27299-201ENSMUST00000184593 103 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm5260-201ENSMUST00000186157 949 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm28384-201ENSMUST00000189079 463 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm37511-201ENSMUST00000192901 294 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm37187-201ENSMUST00000193425 341 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm18952-201ENSMUST00000194471 846 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm42438-201ENSMUST00000197832 974 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm44053-201ENSMUST00000203364 929 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Clec2j-202ENSMUST00000203658 606 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usp39Q3TIX9 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm7648-201ENSMUST00000173036 1658 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm37303-201ENSMUST00000194202 1559 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm12387-201ENSMUST00000118573 955 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm11504-201ENSMUST00000120211 173 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm13357-201ENSMUST00000120528 537 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm15077-201ENSMUST00000122344 362 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 158.5 ms