Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC9.13□□□□□ -0.95
Col17a1Q07563 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm6125-201ENSMUST00000217983 3472 ntBASIC9.13□□□□□ -0.95
Col17a1Q07563 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col17a1Q07563 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Col17a1Q07563 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm45358-201ENSMUST00000209492 2305 ntBASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm13770-201ENSMUST00000117149 305 ntBASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm15877-201ENSMUST00000121897 964 ntBASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm27690-201ENSMUST00000184596 126 ntBASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm28116-201ENSMUST00000189064 387 ntBASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm29551-201ENSMUST00000190913 698 ntBASIC9.13□□□□□ -0.95
Col17a1Q07563 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm8458-201ENSMUST00000196658 819 ntBASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm17915-201ENSMUST00000222077 548 ntBASIC9.13□□□□□ -0.95
Col17a1Q07563 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm26226-201ENSMUST00000082509 116 ntBASIC9.13□□□□□ -0.95
Col17a1Q07563 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm45520-201ENSMUST00000210109 2031 ntBASIC9.13□□□□□ -0.95
Col17a1Q07563 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col17a1Q07563 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col17a1Q07563 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col17a1Q07563 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col17a1Q07563 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col17a1Q07563 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC9.12□□□□□ -0.95
Col17a1Q07563 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Gm29293-201ENSMUST00000189416 2188 ntBASIC9.12□□□□□ -0.95
Col17a1Q07563 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Gm3267-201ENSMUST00000118671 473 ntBASIC9.12□□□□□ -0.95
Col17a1Q07563 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Gm24692-201ENSMUST00000157761 146 ntBASIC9.12□□□□□ -0.95
Col17a1Q07563 Gm23031-201ENSMUST00000157998 119 ntBASIC9.12□□□□□ -0.95
Col17a1Q07563 Gm3145-201ENSMUST00000188584 220 ntBASIC9.12□□□□□ -0.95
Col17a1Q07563 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC9.12□□□□□ -0.95
Col17a1Q07563 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC9.12□□□□□ -0.95
Col17a1Q07563 Gm45908-201ENSMUST00000212977 1177 ntBASIC9.12□□□□□ -0.95
Col17a1Q07563 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC9.12□□□□□ -0.95
Col17a1Q07563 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Col17a1Q07563 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Col17a1Q07563 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Col17a1Q07563 Gm42894-201ENSMUST00000200788 3390 ntBASIC9.12□□□□□ -0.95
Col17a1Q07563 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC9.12□□□□□ -0.95
Col17a1Q07563 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col17a1Q07563 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col17a1Q07563 Gm26984-201ENSMUST00000182345 3510 ntBASIC9.11□□□□□ -0.95
Col17a1Q07563 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Col17a1Q07563 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col17a1Q07563 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Col17a1Q07563 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col17a1Q07563 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC9.11□□□□□ -0.95
Col17a1Q07563 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Col17a1Q07563 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC9.11□□□□□ -0.95
Col17a1Q07563 Gm20701-201ENSMUST00000176082 347 ntBASIC9.11□□□□□ -0.95
Col17a1Q07563 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC9.11□□□□□ -0.95
Col17a1Q07563 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Col17a1Q07563 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC9.11□□□□□ -0.95
Col17a1Q07563 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col17a1Q07563 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col17a1Q07563 Gm28766-201ENSMUST00000191086 234 ntBASIC9.11□□□□□ -0.95
Col17a1Q07563 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col17a1Q07563 Gm4321-201ENSMUST00000200520 442 ntBASIC9.11□□□□□ -0.95
Col17a1Q07563 Gm5318-201ENSMUST00000205249 406 ntBASIC9.11□□□□□ -0.95
Col17a1Q07563 CT009754.4-201ENSMUST00000221430 565 ntBASIC9.11□□□□□ -0.95
Col17a1Q07563 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC9.11□□□□□ -0.95
Col17a1Q07563 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Col17a1Q07563 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC9.11□□□□□ -0.95
Col17a1Q07563 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col17a1Q07563 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Col17a1Q07563 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col17a1Q07563 Gm19552-201ENSMUST00000194744 2833 ntBASIC9.11□□□□□ -0.95
Col17a1Q07563 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col17a1Q07563 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col17a1Q07563 Gm45001-201ENSMUST00000208279 2515 ntBASIC9.11□□□□□ -0.95
Col17a1Q07563 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col17a1Q07563 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Col17a1Q07563 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col17a1Q07563 Gm38224-201ENSMUST00000191648 2100 ntBASIC9.11□□□□□ -0.95
Col17a1Q07563 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Col17a1Q07563 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC9.11□□□□□ -0.95
Col17a1Q07563 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col17a1Q07563 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 125 ms