Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm45658-201ENSMUST00000209197 580 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm45344-201ENSMUST00000211610 341 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col8a1Q00780 AC125020.2-201ENSMUST00000218894 348 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC5.8□□□□□ -1.48
Col8a1Q00780 AC154558.1-201ENSMUST00000222278 415 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 AC165155.1-201ENSMUST00000228932 445 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Snora21-201ENSMUST00000082967 137 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm37906-201ENSMUST00000192050 3035 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm43395-201ENSMUST00000198717 2240 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm38374-201ENSMUST00000194417 2033 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Sec24c-202ENSMUST00000223751 4196 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col8a1Q00780 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm37043-201ENSMUST00000194609 3105 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm20706-201ENSMUST00000175985 2023 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm42568-201ENSMUST00000195639 1841 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col8a1Q00780 AC154270.2-201ENSMUST00000226755 2306 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Mir290a-201ENSMUST00000104627 83 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm16428-201ENSMUST00000121193 723 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm14907-201ENSMUST00000121948 854 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm23030-201ENSMUST00000158004 273 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm15508-201ENSMUST00000160330 325 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm16027-201ENSMUST00000161618 758 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm28023-201ENSMUST00000184556 60 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm27825-201ENSMUST00000184586 60 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm38022-201ENSMUST00000191762 403 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm38329-201ENSMUST00000193473 427 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm9236-201ENSMUST00000196892 587 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.79□□□□□ -1.48
Col8a1Q00780 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm2774-201ENSMUST00000213650 1165 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm19709-201ENSMUST00000215403 482 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.79□□□□□ -1.48
Col8a1Q00780 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.79□□□□□ -1.48
Col8a1Q00780 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC5.79□□□□□ -1.48
Col8a1Q00780 CT030166.1-201ENSMUST00000222654 357 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 AC117814.1-201ENSMUST00000226135 352 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col8a1Q00780 AC121114.1-201ENSMUST00000228522 570 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms