Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm42459-201ENSMUST00000199679 742 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC3.85□□□□□ -1.79
PrkdcP97313 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PrkdcP97313 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PrkdcP97313 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
PrkdcP97313 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PrkdcP97313 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm15075-201ENSMUST00000122187 477 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm20614-201ENSMUST00000177106 632 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm28615-201ENSMUST00000187527 482 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Gm37773-201ENSMUST00000194141 2120 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC3.85□□□□□ -1.79
PrkdcP97313 CU024910.1-201ENSMUST00000214310 418 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 AC153553.1-201ENSMUST00000218257 684 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 AC154734.1-201ENSMUST00000219957 2141 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Olfr480-201ENSMUST00000071658 1029 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PrkdcP97313 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PrkdcP97313 AC107453.4-201ENSMUST00000227068 1817 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm44039-201ENSMUST00000204192 2246 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PrkdcP97313 AC139941.2-201ENSMUST00000221565 1824 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm7312-201ENSMUST00000118798 469 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC3.85□□□□□ -1.79
PrkdcP97313 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm18442-201ENSMUST00000220925 639 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC3.85□□□□□ -1.79
PrkdcP97313 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
PrkdcP97313 Gm43031-201ENSMUST00000198500 1887 ntBASIC3.84□□□□□ -1.79
PrkdcP97313 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
PrkdcP97313 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Gm28503-201ENSMUST00000185966 147 ntBASIC3.84□□□□□ -1.79
PrkdcP97313 Gm29650-201ENSMUST00000188485 742 ntBASIC3.84□□□□□ -1.79
PrkdcP97313 Gm9278-201ENSMUST00000205508 553 ntBASIC3.84□□□□□ -1.79
PrkdcP97313 Gm7093-201ENSMUST00000223004 581 ntBASIC3.84□□□□□ -1.79
PrkdcP97313 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PrkdcP97313 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
PrkdcP97313 Gm11990-201ENSMUST00000121505 897 ntBASIC3.84□□□□□ -1.79
PrkdcP97313 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms