Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm26923-201ENSMUST00000182615 996 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Tpm1P58771 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Tpm1P58771 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 Gm19212-201ENSMUST00000216642 862 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Tpm1P58771 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Tpm1P58771 Gm24200-201ENSMUST00000082955 157 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 Gm6419-201ENSMUST00000097166 429 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Tpm1P58771 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC6.35□□□□□ -1.39
Tpm1P58771 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Tpm1P58771 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Tpm1P58771 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Tpm1P58771 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Tpm1P58771 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Tpm1P58771 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Tpm1P58771 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Tpm1P58771 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Tpm1P58771 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Tpm1P58771 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tpm1P58771 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tpm1P58771 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tpm1P58771 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tpm1P58771 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC6.34□□□□□ -1.39
Tpm1P58771 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tpm1P58771 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tpm1P58771 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Tpm1P58771 Gm12131-201ENSMUST00000117479 359 ntBASIC6.34□□□□□ -1.39
Tpm1P58771 Gm14116-201ENSMUST00000117733 805 ntBASIC6.34□□□□□ -1.39
Tpm1P58771 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Tpm1P58771 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Tpm1P58771 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC6.34□□□□□ -1.39
Tpm1P58771 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.34□□□□□ -1.39
Tpm1P58771 Gm20690-201ENSMUST00000177341 315 ntBASIC6.34□□□□□ -1.39
Tpm1P58771 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
Tpm1P58771 Mir6972-201ENSMUST00000184774 64 ntBASIC6.34□□□□□ -1.39
Tpm1P58771 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.34□□□□□ -1.39
Tpm1P58771 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.34□□□□□ -1.39
Tpm1P58771 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Tpm1P58771 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tpm1P58771 Gm44279-201ENSMUST00000205154 472 ntBASIC6.34□□□□□ -1.39
Tpm1P58771 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.34□□□□□ -1.39
Tpm1P58771 Gm45343-201ENSMUST00000210452 828 ntBASIC6.34□□□□□ -1.39
Tpm1P58771 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Tpm1P58771 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.34□□□□□ -1.39
Tpm1P58771 Gm18591-201ENSMUST00000220568 763 ntBASIC6.34□□□□□ -1.39
Tpm1P58771 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.34□□□□□ -1.39
Tpm1P58771 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Tpm1P58771 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tpm1P58771 Gm26442-201ENSMUST00000082588 153 ntBASIC6.34□□□□□ -1.39
Tpm1P58771 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tpm1P58771 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Tpm1P58771 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.34□□□□□ -1.4
Tpm1P58771 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Tpm1P58771 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Tpm1P58771 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Tpm1P58771 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Tpm1P58771 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
Tpm1P58771 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Tpm1P58771 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Tpm1P58771 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tpm1P58771 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.33□□□□□ -1.4
Tpm1P58771 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tpm1P58771 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Tpm1P58771 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Tpm1P58771 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tpm1P58771 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Tpm1P58771 Gm12077-201ENSMUST00000117049 364 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Gm11256-201ENSMUST00000118109 829 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Gm9506-201ENSMUST00000118516 320 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Gm12262-201ENSMUST00000119915 305 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Gm14679-201ENSMUST00000121536 722 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Gm13531-201ENSMUST00000121893 543 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Tpm1P58771 Gm22326-201ENSMUST00000158897 351 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Tpm1P58771 Gm1972-201ENSMUST00000181606 964 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Gm27185-201ENSMUST00000184296 247 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Gm44382-201ENSMUST00000198683 122 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Gm43906-201ENSMUST00000203194 906 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 AC137117.1-201ENSMUST00000226912 441 ntBASIC6.33□□□□□ -1.4
Tpm1P58771 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tpm1P58771 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Tpm1P58771 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Tpm1P58771 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Tpm1P58771 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Tpm1P58771 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tpm1P58771 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tpm1P58771 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms