Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
NcanP55066 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
NcanP55066 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
NcanP55066 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NcanP55066 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.36□□□□□ -1.39
NcanP55066 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
NcanP55066 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.36□□□□□ -1.39
NcanP55066 Esd-ps-201ENSMUST00000170684 847 ntBASIC6.36□□□□□ -1.39
NcanP55066 Gm17223-201ENSMUST00000171413 481 ntBASIC6.36□□□□□ -1.39
NcanP55066 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28604-201ENSMUST00000186629 484 ntBASIC6.36□□□□□ -1.39
NcanP55066 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28566-201ENSMUST00000186714 484 ntBASIC6.36□□□□□ -1.39
NcanP55066 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28194-201ENSMUST00000187412 484 ntBASIC6.36□□□□□ -1.39
NcanP55066 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28886-202ENSMUST00000187889 484 ntBASIC6.36□□□□□ -1.39
NcanP55066 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.36□□□□□ -1.39
NcanP55066 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm20954-201ENSMUST00000189078 644 ntBASIC6.36□□□□□ -1.39
NcanP55066 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28554-202ENSMUST00000189175 484 ntBASIC6.36□□□□□ -1.39
NcanP55066 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm29213-202ENSMUST00000189703 484 ntBASIC6.36□□□□□ -1.39
NcanP55066 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28851-202ENSMUST00000189757 484 ntBASIC6.36□□□□□ -1.39
NcanP55066 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28461-201ENSMUST00000190023 484 ntBASIC6.36□□□□□ -1.39
NcanP55066 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
NcanP55066 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.36□□□□□ -1.39
NcanP55066 Gm45008-201ENSMUST00000206420 493 ntBASIC6.36□□□□□ -1.39
NcanP55066 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.36□□□□□ -1.39
NcanP55066 Gm5436-201ENSMUST00000058103 643 ntBASIC6.36□□□□□ -1.39
NcanP55066 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
NcanP55066 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NcanP55066 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.36□□□□□ -1.39
NcanP55066 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.36□□□□□ -1.39
NcanP55066 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.36□□□□□ -1.39
NcanP55066 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
NcanP55066 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.36□□□□□ -1.39
NcanP55066 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.36□□□□□ -1.39
NcanP55066 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.35□□□□□ -1.39
NcanP55066 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NcanP55066 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NcanP55066 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NcanP55066 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms