Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC8.89□□□□□ -0.99
Cux1P53564 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC8.89□□□□□ -0.99
Cux1P53564 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC8.89□□□□□ -0.99
Cux1P53564 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Cux1P53564 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC8.89□□□□□ -0.99
Cux1P53564 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC8.89□□□□□ -0.99
Cux1P53564 Gm43794-201ENSMUST00000200971 692 ntBASIC8.89□□□□□ -0.99
Cux1P53564 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC8.89□□□□□ -0.99
Cux1P53564 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC8.89□□□□□ -0.99
Cux1P53564 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC8.89□□□□□ -0.99
Cux1P53564 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC8.89□□□□□ -0.99
Cux1P53564 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cux1P53564 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cux1P53564 AC116726.1-201ENSMUST00000215028 3497 ntBASIC8.89□□□□□ -0.99
Cux1P53564 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC8.88□□□□□ -0.99
Cux1P53564 Gm44829-201ENSMUST00000208008 3193 ntBASIC8.88□□□□□ -0.99
Cux1P53564 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cux1P53564 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Cux1P53564 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC8.88□□□□□ -0.99
Cux1P53564 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cux1P53564 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cux1P53564 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC8.88□□□□□ -0.99
Cux1P53564 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cux1P53564 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Cux1P53564 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cux1P53564 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cux1P53564 Gm27543-201ENSMUST00000183562 177 ntBASIC8.88□□□□□ -0.99
Cux1P53564 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC8.88□□□□□ -0.99
Cux1P53564 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC8.88□□□□□ -0.99
Cux1P53564 AC129219.1-201ENSMUST00000224336 448 ntBASIC8.88□□□□□ -0.99
Cux1P53564 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC8.88□□□□□ -0.99
Cux1P53564 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cux1P53564 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cux1P53564 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cux1P53564 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Cux1P53564 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC8.88□□□□□ -0.99
Cux1P53564 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cux1P53564 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC8.88□□□□□ -0.99
Cux1P53564 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Cux1P53564 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cux1P53564 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC8.87□□□□□ -0.99
Cux1P53564 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC8.87□□□□□ -0.99
Cux1P53564 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC8.87□□□□□ -0.99
Cux1P53564 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC8.87□□□□□ -0.99
Cux1P53564 Gm13590-201ENSMUST00000120183 1588 ntBASIC8.87□□□□□ -0.99
Cux1P53564 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cux1P53564 Gm36947-201ENSMUST00000194709 2249 ntBASIC8.87□□□□□ -0.99
Cux1P53564 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC8.87□□□□□ -0.99
Cux1P53564 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cux1P53564 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cux1P53564 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Cux1P53564 Gm6134-201ENSMUST00000117265 171 ntBASIC8.87□□□□□ -0.99
Cux1P53564 Gm15840-201ENSMUST00000122099 943 ntBASIC8.87□□□□□ -0.99
Cux1P53564 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cux1P53564 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC8.87□□□□□ -0.99
Cux1P53564 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC8.87□□□□□ -0.99
Cux1P53564 AC154846.2-201ENSMUST00000228805 424 ntBASIC8.87□□□□□ -0.99
Cux1P53564 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cux1P53564 Mir342-201ENSMUST00000083502 99 ntBASIC8.87□□□□□ -0.99
Cux1P53564 Mir129-1-201ENSMUST00000083535 73 ntBASIC8.87□□□□□ -0.99
Cux1P53564 Mir133b-201ENSMUST00000083546 119 ntBASIC8.87□□□□□ -0.99
Cux1P53564 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cux1P53564 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cux1P53564 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.87□□□□□ -0.99
Cux1P53564 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cux1P53564 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cux1P53564 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Cux1P53564 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cux1P53564 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cux1P53564 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cux1P53564 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cux1P53564 Gm12287-201ENSMUST00000119770 707 ntBASIC8.86□□□□□ -0.99
Cux1P53564 Gm13738-201ENSMUST00000122437 469 ntBASIC8.86□□□□□ -0.99
Cux1P53564 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cux1P53564 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC8.86□□□□□ -0.99
Cux1P53564 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cux1P53564 Gm37421-201ENSMUST00000193088 132 ntBASIC8.86□□□□□ -0.99
Cux1P53564 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC8.86□□□□□ -0.99
Cux1P53564 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cux1P53564 Gm44048-201ENSMUST00000204531 361 ntBASIC8.86□□□□□ -0.99
Cux1P53564 AC124549.1-201ENSMUST00000225912 333 ntBASIC8.86□□□□□ -0.99
Cux1P53564 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Cux1P53564 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cux1P53564 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cux1P53564 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cux1P53564 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Cux1P53564 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC8.86□□□□□ -0.99
Cux1P53564 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Cux1P53564 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.86□□□□□ -0.99
Cux1P53564 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cux1P53564 AC140299.2-201ENSMUST00000219546 1969 ntBASIC8.86□□□□□ -0.99
Cux1P53564 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cux1P53564 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Cux1P53564 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Cux1P53564 Gm37278-201ENSMUST00000191619 2872 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Gm15766-201ENSMUST00000118025 813 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Gm11805-201ENSMUST00000121238 600 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Gm3053-201ENSMUST00000161709 616 ntBASIC8.85□□□□□ -0.99
Cux1P53564 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms