Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm44739-201ENSMUST00000205294 1426 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Cd28P31041 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Cd28P31041 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cd28P31041 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC4.92□□□□□ -1.62
Cd28P31041 Gm12077-201ENSMUST00000117049 364 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Gm15765-201ENSMUST00000118407 910 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Gm12281-201ENSMUST00000119536 298 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Gm15237-201ENSMUST00000122104 469 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC4.92□□□□□ -1.62
Cd28P31041 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Gm23027-201ENSMUST00000158771 158 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 Gm1972-201ENSMUST00000181606 964 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Mir6992-201ENSMUST00000183342 109 ntBASIC4.92□□□□□ -1.62
Cd28P31041 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC4.92□□□□□ -1.62
Cd28P31041 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC4.92□□□□□ -1.62
Cd28P31041 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC4.92□□□□□ -1.62
Cd28P31041 Gm7990-201ENSMUST00000212126 593 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC4.92□□□□□ -1.62
Cd28P31041 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.92□□□□□ -1.62
Cd28P31041 CT030184.2-201ENSMUST00000223064 263 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC4.92□□□□□ -1.62
Cd28P31041 AC137117.1-201ENSMUST00000226912 441 ntBASIC4.92□□□□□ -1.62
Cd28P31041 AC135086.1-201ENSMUST00000228621 817 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cd28P31041 n-R5s88-201ENSMUST00000083173 118 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Cd28P31041 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Cd28P31041 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Cd28P31041 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cd28P31041 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC4.92□□□□□ -1.62
Cd28P31041 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.92□□□□□ -1.62
Cd28P31041 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Cd28P31041 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC4.91□□□□□ -1.62
Cd28P31041 Gm42508-201ENSMUST00000199972 3292 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Gm43258-201ENSMUST00000200312 1950 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Cd28P31041 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
Cd28P31041 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Gm11624-201ENSMUST00000118579 1041 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Gm13899-201ENSMUST00000121519 1255 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Gm15877-201ENSMUST00000121897 964 ntBASIC4.91□□□□□ -1.62
Cd28P31041 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC4.91□□□□□ -1.62
Cd28P31041 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Gm23233-201ENSMUST00000157301 137 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Gm26069-201ENSMUST00000157497 277 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Cd28P31041 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Gm27185-201ENSMUST00000184296 247 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Gm29496-201ENSMUST00000189854 693 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Gm4322-201ENSMUST00000191094 336 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Gm38122-201ENSMUST00000192679 885 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC4.91□□□□□ -1.62
Cd28P31041 AC151967.1-201ENSMUST00000198146 76 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC4.91□□□□□ -1.62
Cd28P31041 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC4.91□□□□□ -1.62
Cd28P31041 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Cd28P31041 Gm46311-201ENSMUST00000217971 203 ntBASIC4.91□□□□□ -1.62
Cd28P31041 AC133598.3-204ENSMUST00000224260 767 ntBASIC4.91□□□□□ -1.62
Cd28P31041 AC154767.2-201ENSMUST00000224584 414 ntBASIC4.91□□□□□ -1.62
Cd28P31041 CU062626.1-201ENSMUST00000225248 505 ntBASIC4.91□□□□□ -1.62
Cd28P31041 AC154634.2-201ENSMUST00000225983 1184 ntBASIC4.91□□□□□ -1.62
Cd28P31041 AC164597.1-201ENSMUST00000226538 514 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Cd28P31041 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Cd28P31041 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.91□□□□□ -1.62
Cd28P31041 Gm43343-201ENSMUST00000202454 1926 ntBASIC4.91□□□□□ -1.62
Cd28P31041 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cd28P31041 Gm5512-201ENSMUST00000218013 1353 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms