Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm12322-201ENSMUST00000121605 389 ntBASIC6.58□□□□□ -1.36
Col2a1P28481 Gm23233-201ENSMUST00000157301 137 ntBASIC6.58□□□□□ -1.36
Col2a1P28481 Gm24216-201ENSMUST00000158259 117 ntBASIC6.58□□□□□ -1.36
Col2a1P28481 Mir1963-201ENSMUST00000158594 59 ntBASIC6.58□□□□□ -1.36
Col2a1P28481 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col2a1P28481 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.58□□□□□ -1.36
Col2a1P28481 Gm6543-201ENSMUST00000197353 808 ntBASIC6.58□□□□□ -1.36
Col2a1P28481 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.58□□□□□ -1.36
Col2a1P28481 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.58□□□□□ -1.36
Col2a1P28481 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.58□□□□□ -1.36
Col2a1P28481 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col2a1P28481 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col2a1P28481 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Col2a1P28481 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Col2a1P28481 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.58□□□□□ -1.36
Col2a1P28481 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col2a1P28481 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col2a1P28481 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col2a1P28481 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Col2a1P28481 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col2a1P28481 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Col2a1P28481 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Col2a1P28481 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
Col2a1P28481 Gm13681-201ENSMUST00000117925 210 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 Gm8595-201ENSMUST00000118250 630 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 Gm6382-201ENSMUST00000118873 942 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 Gm5405-201ENSMUST00000120478 609 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Gm23250-201ENSMUST00000157444 267 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 Gm22261-201ENSMUST00000158691 324 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Mir3062-201ENSMUST00000174986 105 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 Gm26595-201ENSMUST00000181585 484 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC6.57□□□□□ -1.36
Col2a1P28481 Gm44539-201ENSMUST00000206010 238 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Col2a1P28481 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 Gm7768-201ENSMUST00000222988 597 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.57□□□□□ -1.36
Col2a1P28481 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Col2a1P28481 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Col2a1P28481 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Col2a1P28481 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Col2a1P28481 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col2a1P28481 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col2a1P28481 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col2a1P28481 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col2a1P28481 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.56□□□□□ -1.36
Col2a1P28481 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col2a1P28481 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col2a1P28481 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col2a1P28481 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col2a1P28481 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col2a1P28481 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col2a1P28481 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Col2a1P28481 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col2a1P28481 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col2a1P28481 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col2a1P28481 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col2a1P28481 Gm6134-201ENSMUST00000117265 171 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 Gm14512-201ENSMUST00000117924 230 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 Gm4989-201ENSMUST00000118711 749 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 Gm12074-201ENSMUST00000120189 219 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.56□□□□□ -1.36
Col2a1P28481 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 Mir3110-201ENSMUST00000175053 80 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col2a1P28481 Gm22420-201ENSMUST00000178795 126 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC6.56□□□□□ -1.36
Col2a1P28481 Gm28017-201ENSMUST00000183434 126 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 Mir6417-201ENSMUST00000183815 116 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 Gm29454-201ENSMUST00000190805 393 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col2a1P28481 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.56□□□□□ -1.36
Col2a1P28481 Gm45777-201ENSMUST00000213009 301 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col2a1P28481 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col2a1P28481 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col2a1P28481 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms