Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.19□□□□□ -1.58
P20040 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
P20040 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
P20040 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.19□□□□□ -1.58
P20040 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.19□□□□□ -1.58
P20040 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
P20040 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.19□□□□□ -1.58
P20040 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
P20040 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
P20040 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
P20040 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
P20040 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.18□□□□□ -1.58
P20040 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
P20040 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
P20040 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
P20040 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
P20040 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.18□□□□□ -1.58
P20040 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.18□□□□□ -1.58
P20040 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.18□□□□□ -1.58
P20040 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.18□□□□□ -1.58
P20040 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
P20040 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
P20040 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
P20040 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
P20040 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
P20040 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
P20040 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
P20040 Gm15781-201ENSMUST00000120216 323 ntBASIC5.18□□□□□ -1.58
P20040 Gm22214-201ENSMUST00000157563 172 ntBASIC5.18□□□□□ -1.58
P20040 Gm27006-201ENSMUST00000182218 943 ntBASIC5.18□□□□□ -1.58
P20040 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
P20040 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
P20040 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.18□□□□□ -1.58
P20040 Gm20561-201ENSMUST00000188131 292 ntBASIC5.18□□□□□ -1.58
P20040 Gm29111-201ENSMUST00000188823 696 ntBASIC5.18□□□□□ -1.58
P20040 Gm28584-201ENSMUST00000191489 696 ntBASIC5.18□□□□□ -1.58
P20040 Gm38138-201ENSMUST00000193274 696 ntBASIC5.18□□□□□ -1.58
P20040 Gm37991-201ENSMUST00000194297 696 ntBASIC5.18□□□□□ -1.58
P20040 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.18□□□□□ -1.58
P20040 Gm44312-201ENSMUST00000203536 469 ntBASIC5.18□□□□□ -1.58
P20040 Gm5886-202ENSMUST00000203957 522 ntBASIC5.18□□□□□ -1.58
P20040 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.18□□□□□ -1.58
P20040 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.18□□□□□ -1.58
P20040 Gm19186-201ENSMUST00000219922 333 ntBASIC5.18□□□□□ -1.58
P20040 Gm18405-201ENSMUST00000220743 511 ntBASIC5.18□□□□□ -1.58
P20040 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.18□□□□□ -1.58
P20040 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.18□□□□□ -1.58
P20040 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
P20040 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
P20040 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
P20040 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
P20040 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
P20040 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
P20040 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
P20040 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.18□□□□□ -1.58
P20040 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.18□□□□□ -1.58
P20040 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
P20040 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
P20040 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
P20040 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
P20040 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
P20040 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
P20040 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.17□□□□□ -1.58
P20040 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
P20040 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
P20040 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
P20040 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
P20040 Gm22953-201ENSMUST00000116724 101 ntBASIC5.17□□□□□ -1.58
P20040 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.17□□□□□ -1.58
P20040 Gm16074-201ENSMUST00000119524 444 ntBASIC5.17□□□□□ -1.58
P20040 Gm11990-201ENSMUST00000121505 897 ntBASIC5.17□□□□□ -1.58
P20040 Gm14349-201ENSMUST00000137155 902 ntBASIC5.17□□□□□ -1.58
P20040 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.17□□□□□ -1.58
P20040 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.17□□□□□ -1.58
P20040 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.17□□□□□ -1.58
P20040 Gm23995-201ENSMUST00000158060 129 ntBASIC5.17□□□□□ -1.58
P20040 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.17□□□□□ -1.58
P20040 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.17□□□□□ -1.58
P20040 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
P20040 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
P20040 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.17□□□□□ -1.58
P20040 Gm37358-201ENSMUST00000195492 479 ntBASIC5.17□□□□□ -1.58
P20040 Gm43392-201ENSMUST00000196560 434 ntBASIC5.17□□□□□ -1.58
P20040 Gm31211-201ENSMUST00000199170 253 ntBASIC5.17□□□□□ -1.58
P20040 Gm44162-201ENSMUST00000203543 544 ntBASIC5.17□□□□□ -1.58
P20040 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.17□□□□□ -1.58
P20040 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.17□□□□□ -1.58
P20040 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.17□□□□□ -1.58
P20040 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC5.17□□□□□ -1.58
P20040 Gm38574-201ENSMUST00000211855 640 ntBASIC5.17□□□□□ -1.58
P20040 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.17□□□□□ -1.58
P20040 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.17□□□□□ -1.58
P20040 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.17□□□□□ -1.58
P20040 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.17□□□□□ -1.58
P20040 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.17□□□□□ -1.58
P20040 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
P20040 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
P20040 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
P20040 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
P20040 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms