Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm43128-201ENSMUST00000202212 1621 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm9506-201ENSMUST00000118516 320 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm14791-201ENSMUST00000119061 1166 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Gm14614-201ENSMUST00000119873 384 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx1P18111 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm23674-201ENSMUST00000157473 131 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Gm22523-201ENSMUST00000158696 100 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Gm25574-201ENSMUST00000175245 249 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx1P18111 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm8183-201ENSMUST00000183134 980 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Gm27507-201ENSMUST00000184199 93 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Gm28023-201ENSMUST00000184556 60 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Gm27825-201ENSMUST00000184586 60 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm28620-201ENSMUST00000190463 439 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm29784-201ENSMUST00000196217 406 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 AL929555.1-201ENSMUST00000215283 509 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.88□□□□□ -1.63
Cdx1P18111 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx1P18111 AC154642.1-201ENSMUST00000224173 740 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx1P18111 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx1P18111 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm24032-201ENSMUST00000083932 159 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx1P18111 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cdx1P18111 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Gm9575-201ENSMUST00000122140 1339 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Cdx1P18111 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC4.88□□□□□ -1.63
Cdx1P18111 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm12388-201ENSMUST00000119112 1887 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Gm14857-201ENSMUST00000117862 3185 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdx1P18111 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 Gm19552-201ENSMUST00000194744 2833 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdx1P18111 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 AC154627.2-201ENSMUST00000227028 4669 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdx1P18111 Gm38362-201ENSMUST00000192999 2064 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
Cdx1P18111 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdx1P18111 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cdx1P18111 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cdx1P18111 Gm24272-201ENSMUST00000102329 98 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdx1P18111 Gm12101-201ENSMUST00000121590 390 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Gm2986-201ENSMUST00000121603 382 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Gm24383-201ENSMUST00000122691 333 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Gm12833-201ENSMUST00000136112 477 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC4.87□□□□□ -1.63
Cdx1P18111 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Gm25675-201ENSMUST00000174979 118 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdx1P18111 Gm26509-201ENSMUST00000180947 948 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdx1P18111 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdx1P18111 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx1P18111 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdx1P18111 Gm43576-201ENSMUST00000197937 871 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Gm3321-201ENSMUST00000200603 1129 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC4.87□□□□□ -1.63
Cdx1P18111 Gm6009-201ENSMUST00000210848 280 ntBASIC4.87□□□□□ -1.63
Cdx1P18111 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms