Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm11677-201ENSMUST00000121349 977 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Gm23954-201ENSMUST00000157213 353 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Gm17086-201ENSMUST00000171346 484 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Mir5103-201ENSMUST00000175111 79 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Gm26731-201ENSMUST00000180683 543 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Mir7685-201ENSMUST00000183555 62 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Mir7056-201ENSMUST00000183776 59 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col1a1P11087 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.83□□□□□ -1.32
Col1a1P11087 Gm3257-201ENSMUST00000207217 675 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col1a1P11087 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col1a1P11087 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col1a1P11087 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col1a1P11087 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col1a1P11087 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col1a1P11087 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col1a1P11087 Gm18632-201ENSMUST00000222597 2087 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.82□□□□□ -1.32
Col1a1P11087 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.82□□□□□ -1.32
Col1a1P11087 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.82□□□□□ -1.32
Col1a1P11087 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col1a1P11087 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.82□□□□□ -1.32
Col1a1P11087 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col1a1P11087 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col1a1P11087 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col1a1P11087 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col1a1P11087 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Col1a1P11087 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col1a1P11087 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col1a1P11087 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.82□□□□□ -1.32
Col1a1P11087 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.82□□□□□ -1.32
Col1a1P11087 Gm7309-201ENSMUST00000121670 581 ntBASIC6.82□□□□□ -1.32
Col1a1P11087 Gm25383-201ENSMUST00000157810 144 ntBASIC6.82□□□□□ -1.32
Col1a1P11087 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.82□□□□□ -1.32
Col1a1P11087 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.82□□□□□ -1.32
Col1a1P11087 Mir7087-201ENSMUST00000184840 70 ntBASIC6.82□□□□□ -1.32
Col1a1P11087 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC6.82□□□□□ -1.32
Col1a1P11087 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.82□□□□□ -1.32
Col1a1P11087 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.82□□□□□ -1.32
Col1a1P11087 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col1a1P11087 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col1a1P11087 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col1a1P11087 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col1a1P11087 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col1a1P11087 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Col1a1P11087 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Col1a1P11087 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col1a1P11087 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col1a1P11087 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col1a1P11087 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Col1a1P11087 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.82□□□□□ -1.32
Col1a1P11087 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.81□□□□□ -1.32
Col1a1P11087 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col1a1P11087 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.81□□□□□ -1.32
Col1a1P11087 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col1a1P11087 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col1a1P11087 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
Col1a1P11087 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col1a1P11087 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Col1a1P11087 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.81□□□□□ -1.32
Col1a1P11087 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col1a1P11087 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col1a1P11087 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col1a1P11087 Gm3053-201ENSMUST00000161709 616 ntBASIC6.81□□□□□ -1.32
Col1a1P11087 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Col1a1P11087 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.81□□□□□ -1.32
Col1a1P11087 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.81□□□□□ -1.32
Col1a1P11087 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.81□□□□□ -1.32
Col1a1P11087 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.81□□□□□ -1.32
Col1a1P11087 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.81□□□□□ -1.32
Col1a1P11087 Gm9386-201ENSMUST00000095195 381 ntBASIC6.81□□□□□ -1.32
Col1a1P11087 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
Col1a1P11087 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
Col1a1P11087 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col1a1P11087 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.81□□□□□ -1.32
Col1a1P11087 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col1a1P11087 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Col1a1P11087 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.81□□□□□ -1.32
Col1a1P11087 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col1a1P11087 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col1a1P11087 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col1a1P11087 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col1a1P11087 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col1a1P11087 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col1a1P11087 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.8□□□□□ -1.32
Col1a1P11087 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col1a1P11087 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col1a1P11087 Gm22499-201ENSMUST00000104501 135 ntBASIC6.8□□□□□ -1.32
Col1a1P11087 Gm11805-201ENSMUST00000121238 600 ntBASIC6.8□□□□□ -1.32
Col1a1P11087 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.8□□□□□ -1.32
Col1a1P11087 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.8□□□□□ -1.32
Col1a1P11087 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.8□□□□□ -1.32
Col1a1P11087 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col1a1P11087 Gm31306-201ENSMUST00000197517 508 ntBASIC6.8□□□□□ -1.32
Col1a1P11087 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.8□□□□□ -1.32
Col1a1P11087 Gm6009-201ENSMUST00000210848 280 ntBASIC6.8□□□□□ -1.32
Col1a1P11087 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms