Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm43689-201ENSMUST00000195951 427 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm43345-201ENSMUST00000199484 269 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm44931-201ENSMUST00000206056 545 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm45070-201ENSMUST00000208100 246 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm2221-201ENSMUST00000209342 418 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 AC118733.1-201ENSMUST00000217387 1217 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm46364-201ENSMUST00000218548 319 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 AC156803.1-201ENSMUST00000224407 820 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Mir16-2-201ENSMUST00000083672 95 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm38374-201ENSMUST00000194417 2033 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm15443-201ENSMUST00000118947 820 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms