Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm44777-201ENSMUST00000205941 4052 ntBASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm7840-201ENSMUST00000122086 533 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm44134-202ENSMUST00000204777 545 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm37048-201ENSMUST00000194827 5578 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm44742-201ENSMUST00000207190 1412 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm25169-201ENSMUST00000104190 129 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm15158-201ENSMUST00000120577 570 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm6175-201ENSMUST00000121351 400 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm12693-201ENSMUST00000121965 483 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm23069-201ENSMUST00000158240 311 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Scarna10-201ENSMUST00000158992 325 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Mir713-201ENSMUST00000178651 108 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm16394-201ENSMUST00000117289 675 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm13745-201ENSMUST00000121994 527 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm29111-201ENSMUST00000188823 696 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm28584-201ENSMUST00000191489 696 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm18407-201ENSMUST00000192126 790 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm38138-201ENSMUST00000193274 696 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm37991-201ENSMUST00000194297 696 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm44580-201ENSMUST00000206333 877 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Olfr881-201ENSMUST00000074611 948 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Dennd6a-203ENSMUST00000224111 2692 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a3E9PWQ3 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Fam212b-201ENSMUST00000066610 4701 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm8051-201ENSMUST00000120464 466 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm12583-201ENSMUST00000120677 853 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm43629-201ENSMUST00000201782 704 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Nbr1-202ENSMUST00000103098 4654 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Ptprb-201ENSMUST00000092167 11911 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm14679-201ENSMUST00000121536 722 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms