Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm44209-201ENSMUST00000204556 4153 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC4.9□□□□□ -1.62
Col6a4A2AX52 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Col6a4A2AX52 Gm38697-201ENSMUST00000198061 1746 ntBASIC4.9□□□□□ -1.62
Col6a4A2AX52 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col6a4A2AX52 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col6a4A2AX52 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
Col6a4A2AX52 Gm22778-201ENSMUST00000104090 128 ntBASIC4.9□□□□□ -1.62
Col6a4A2AX52 Gm11774-201ENSMUST00000118601 293 ntBASIC4.9□□□□□ -1.62
Col6a4A2AX52 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC4.9□□□□□ -1.62
Col6a4A2AX52 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Col6a4A2AX52 Gm14349-201ENSMUST00000137155 902 ntBASIC4.9□□□□□ -1.62
Col6a4A2AX52 Gm22235-201ENSMUST00000157085 110 ntBASIC4.9□□□□□ -1.62
Col6a4A2AX52 Gm24860-201ENSMUST00000158457 276 ntBASIC4.9□□□□□ -1.62
Col6a4A2AX52 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col6a4A2AX52 Gm28973-201ENSMUST00000189310 613 ntBASIC4.9□□□□□ -1.62
Col6a4A2AX52 Gm37308-201ENSMUST00000194684 100 ntBASIC4.9□□□□□ -1.62
Col6a4A2AX52 Gm44494-201ENSMUST00000196760 129 ntBASIC4.9□□□□□ -1.62
Col6a4A2AX52 Gm20786-201ENSMUST00000212649 436 ntBASIC4.9□□□□□ -1.62
Col6a4A2AX52 AC162467.1-201ENSMUST00000220254 621 ntBASIC4.9□□□□□ -1.62
Col6a4A2AX52 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Col6a4A2AX52 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
Col6a4A2AX52 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col6a4A2AX52 Gm45297-201ENSMUST00000209893 3483 ntBASIC4.9□□□□□ -1.62
Col6a4A2AX52 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col6a4A2AX52 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Col6a4A2AX52 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Col6a4A2AX52 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm13259-201ENSMUST00000120792 456 ntBASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm11805-201ENSMUST00000121238 600 ntBASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm11507-201ENSMUST00000156462 412 ntBASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm22277-201ENSMUST00000157204 277 ntBASIC4.9□□□□□ -1.63
Col6a4A2AX52 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm28061-201ENSMUST00000189085 807 ntBASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm37838-201ENSMUST00000194464 312 ntBASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm43744-201ENSMUST00000196387 688 ntBASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm18215-201ENSMUST00000204429 798 ntBASIC4.9□□□□□ -1.63
Col6a4A2AX52 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm44833-201ENSMUST00000208368 331 ntBASIC4.9□□□□□ -1.63
Col6a4A2AX52 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm5457-201ENSMUST00000022260 333 ntBASIC4.9□□□□□ -1.63
Col6a4A2AX52 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 AC164107.1-202ENSMUST00000228953 1816 ntBASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a4A2AX52 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm44255-201ENSMUST00000203456 2053 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm43162-201ENSMUST00000198292 1770 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm25422-201ENSMUST00000104219 129 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm11318-201ENSMUST00000118640 961 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm13473-201ENSMUST00000119289 367 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms