Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Mir5133-201ENSMUST00000174955 77 ntBASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn9Q9Z0S7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn9Q9Z0S7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn9Q9Z0S7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn9Q9Z0S7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn9Q9Z0S7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn9Q9Z0S7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn9Q9Z0S7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cldn9Q9Z0S7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.26■□□□□ 0.35
Cldn9Q9Z0S7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn9Q9Z0S7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn9Q9Z0S7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn9Q9Z0S7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn9Q9Z0S7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn9Q9Z0S7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.26■□□□□ 0.35
Cldn9Q9Z0S7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Gm13148-201ENSMUST00000118892 745 ntBASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn9Q9Z0S7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn9Q9Z0S7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn9Q9Z0S7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Gm2399-201ENSMUST00000104944 225 ntBASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Gm37179-201ENSMUST00000194862 823 ntBASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Gm44549-201ENSMUST00000208351 577 ntBASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms