Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.56■□□□□ 0.4
Atp6ap1Q9R1Q9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Gm38285-201ENSMUST00000192928 922 ntBASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp6ap1Q9R1Q9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Gm12896-201ENSMUST00000118430 226 ntBASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp6ap1Q9R1Q9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.53■□□□□ 0.4
Atp6ap1Q9R1Q9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp6ap1Q9R1Q9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atp6ap1Q9R1Q9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp6ap1Q9R1Q9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Atp6ap1Q9R1Q9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp6ap1Q9R1Q9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp6ap1Q9R1Q9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp6ap1Q9R1Q9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp6ap1Q9R1Q9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp6ap1Q9R1Q9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Atp6ap1Q9R1Q9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.51■□□□□ 0.39
Atp6ap1Q9R1Q9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms