Protein–RNA interactions for Protein: Q9R0A5

Nek3, Serine/threonine-protein kinase Nek3, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek3Q9R0A5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nek3Q9R0A5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nek3Q9R0A5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.66■□□□□ 0.74
Nek3Q9R0A5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nek3Q9R0A5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nek3Q9R0A5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nek3Q9R0A5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek3Q9R0A5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek3Q9R0A5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek3Q9R0A5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.64■□□□□ 0.73
Nek3Q9R0A5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.64■□□□□ 0.73
Nek3Q9R0A5 Gm6420-201ENSMUST00000193885 723 ntBASIC19.64■□□□□ 0.73
Nek3Q9R0A5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.64■□□□□ 0.73
Nek3Q9R0A5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nek3Q9R0A5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek3Q9R0A5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek3Q9R0A5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.64■□□□□ 0.73
Nek3Q9R0A5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Nek3Q9R0A5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek3Q9R0A5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Nek3Q9R0A5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek3Q9R0A5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek3Q9R0A5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek3Q9R0A5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nek3Q9R0A5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek3Q9R0A5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek3Q9R0A5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.63■□□□□ 0.73
Nek3Q9R0A5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek3Q9R0A5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Nek3Q9R0A5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.63■□□□□ 0.73
Nek3Q9R0A5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek3Q9R0A5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek3Q9R0A5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek3Q9R0A5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.62■□□□□ 0.73
Nek3Q9R0A5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nek3Q9R0A5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek3Q9R0A5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek3Q9R0A5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek3Q9R0A5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek3Q9R0A5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.62■□□□□ 0.73
Nek3Q9R0A5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Nek3Q9R0A5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek3Q9R0A5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek3Q9R0A5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek3Q9R0A5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek3Q9R0A5 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.62■□□□□ 0.73
Nek3Q9R0A5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Nespas-201ENSMUST00000143738 1083 ntBASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nek3Q9R0A5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek3Q9R0A5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek3Q9R0A5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Nek3Q9R0A5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek3Q9R0A5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms