Protein–RNA interactions for Protein: Q9QY39

Pdzd4, PDZ domain-containing protein 4, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd4Q9QY39 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 Gm2399-201ENSMUST00000104944 225 ntBASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzd4Q9QY39 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 Gm11249-201ENSMUST00000117071 859 ntBASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzd4Q9QY39 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Gm22325-201ENSMUST00000158904 308 ntBASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pdzd4Q9QY39 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzd4Q9QY39 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzd4Q9QY39 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pdzd4Q9QY39 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdzd4Q9QY39 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdzd4Q9QY39 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Pdzd4Q9QY39 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms