Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm11249-201ENSMUST00000117071 859 ntBASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18■□□□□ 0.47
Shroom3Q9QXN0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shroom3Q9QXN0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Mir1199-201ENSMUST00000117015 119 ntBASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom3Q9QXN0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom3Q9QXN0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Shroom3Q9QXN0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom3Q9QXN0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Shroom3Q9QXN0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom3Q9QXN0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Shroom3Q9QXN0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.98■□□□□ 0.47
Shroom3Q9QXN0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom3Q9QXN0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom3Q9QXN0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom3Q9QXN0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom3Q9QXN0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom3Q9QXN0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.97■□□□□ 0.47
Shroom3Q9QXN0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom3Q9QXN0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Gm13158-201ENSMUST00000122007 736 ntBASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Mtag2-201ENSMUST00000058665 714 ntBASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms