Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prg4Q9JM99 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Prg4Q9JM99 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prg4Q9JM99 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prg4Q9JM99 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prg4Q9JM99 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prg4Q9JM99 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prg4Q9JM99 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Prg4Q9JM99 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prg4Q9JM99 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Prg4Q9JM99 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prg4Q9JM99 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prg4Q9JM99 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prg4Q9JM99 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prg4Q9JM99 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prg4Q9JM99 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prg4Q9JM99 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prg4Q9JM99 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prg4Q9JM99 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prg4Q9JM99 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prg4Q9JM99 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prg4Q9JM99 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.3■□□□□ 0.2
Prg4Q9JM99 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prg4Q9JM99 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Prg4Q9JM99 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prg4Q9JM99 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prg4Q9JM99 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Prg4Q9JM99 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Odf3b-204ENSMUST00000227834 930 ntBASIC16.29■□□□□ 0.2
Prg4Q9JM99 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Prg4Q9JM99 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.29■□□□□ 0.2
Prg4Q9JM99 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prg4Q9JM99 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Gm21814-202ENSMUST00000203277 873 ntBASIC16.28■□□□□ 0.2
Prg4Q9JM99 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prg4Q9JM99 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.28■□□□□ 0.2
Prg4Q9JM99 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Prg4Q9JM99 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Prg4Q9JM99 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prg4Q9JM99 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prg4Q9JM99 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prg4Q9JM99 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prg4Q9JM99 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Prg4Q9JM99 Mir5122-201ENSMUST00000175004 89 ntBASIC16.27■□□□□ 0.2
Prg4Q9JM99 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prg4Q9JM99 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prg4Q9JM99 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prg4Q9JM99 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prg4Q9JM99 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prg4Q9JM99 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prg4Q9JM99 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prg4Q9JM99 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prg4Q9JM99 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms