Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.59■□□□□ 0.57
Scn5aQ9JJV9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn5aQ9JJV9 Gm13401-201ENSMUST00000117074 291 ntBASIC18.59■□□□□ 0.57
Scn5aQ9JJV9 Gm17971-201ENSMUST00000190239 806 ntBASIC18.59■□□□□ 0.57
Scn5aQ9JJV9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn5aQ9JJV9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Scn5aQ9JJV9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Scn5aQ9JJV9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn5aQ9JJV9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn5aQ9JJV9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn5aQ9JJV9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 Gm16061-201ENSMUST00000122167 857 ntBASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 Gm7370-201ENSMUST00000219471 767 ntBASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn5aQ9JJV9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Gm9103-201ENSMUST00000119371 405 ntBASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn5aQ9JJV9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Gm22697-201ENSMUST00000175194 63 ntBASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn5aQ9JJV9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn5aQ9JJV9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Mir5130-201ENSMUST00000175160 84 ntBASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn5aQ9JJV9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn5aQ9JJV9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn5aQ9JJV9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Scn5aQ9JJV9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Scn5aQ9JJV9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.53■□□□□ 0.56
Scn5aQ9JJV9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Scn5aQ9JJV9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn5aQ9JJV9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn5aQ9JJV9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Scn5aQ9JJV9 Notumos-201ENSMUST00000151998 2659 ntBASIC18.53■□□□□ 0.56
Scn5aQ9JJV9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn5aQ9JJV9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn5aQ9JJV9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn5aQ9JJV9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms