Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Mir6349-201ENSMUST00000184059 97 ntBASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h8Q9JJ48 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.63■□□□□ 0.25
Zc3h8Q9JJ48 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zc3h8Q9JJ48 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Zc3h8Q9JJ48 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zc3h8Q9JJ48 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Zc3h8Q9JJ48 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.63■□□□□ 0.25
Zc3h8Q9JJ48 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zc3h8Q9JJ48 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zc3h8Q9JJ48 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zc3h8Q9JJ48 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zc3h8Q9JJ48 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zc3h8Q9JJ48 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zc3h8Q9JJ48 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Mir2861-201ENSMUST00000175539 82 ntBASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.61■□□□□ 0.25
Zc3h8Q9JJ48 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Gm18025-201ENSMUST00000221733 862 ntBASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zc3h8Q9JJ48 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zc3h8Q9JJ48 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Zc3h8Q9JJ48 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Zc3h8Q9JJ48 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Zc3h8Q9JJ48 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.59■□□□□ 0.25
Zc3h8Q9JJ48 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zc3h8Q9JJ48 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zc3h8Q9JJ48 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.59■□□□□ 0.25
Zc3h8Q9JJ48 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zc3h8Q9JJ48 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms