Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Gm10493-201ENSMUST00000097270 612 ntBASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rbfox1Q9JJ43 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rbfox1Q9JJ43 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.27■□□□□ 0.04
Rbfox1Q9JJ43 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rbfox1Q9JJ43 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rbfox1Q9JJ43 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.27■□□□□ 0.04
Rbfox1Q9JJ43 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rbfox1Q9JJ43 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rbfox1Q9JJ43 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rbfox1Q9JJ43 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rbfox1Q9JJ43 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Rbfox1Q9JJ43 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rbfox1Q9JJ43 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rbfox1Q9JJ43 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rbfox1Q9JJ43 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rbfox1Q9JJ43 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rbfox1Q9JJ43 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rbfox1Q9JJ43 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rbfox1Q9JJ43 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.24■□□□□ 0.03
Rbfox1Q9JJ43 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rbfox1Q9JJ43 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rbfox1Q9JJ43 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rbfox1Q9JJ43 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rbfox1Q9JJ43 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rbfox1Q9JJ43 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rbfox1Q9JJ43 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.23■□□□□ 0.03
Rbfox1Q9JJ43 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rbfox1Q9JJ43 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rbfox1Q9JJ43 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rbfox1Q9JJ43 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rbfox1Q9JJ43 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rbfox1Q9JJ43 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rbfox1Q9JJ43 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms