Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Gm9847-201ENSMUST00000052528 599 ntBASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4bQ9ES00 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4bQ9ES00 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ube4bQ9ES00 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4bQ9ES00 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.22■□□□□ 0.35
Ube4bQ9ES00 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4bQ9ES00 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.22■□□□□ 0.35
Ube4bQ9ES00 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4bQ9ES00 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4bQ9ES00 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ube4bQ9ES00 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4bQ9ES00 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ube4bQ9ES00 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4bQ9ES00 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4bQ9ES00 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4bQ9ES00 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4bQ9ES00 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4bQ9ES00 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ube4bQ9ES00 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ube4bQ9ES00 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Ube4bQ9ES00 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ube4bQ9ES00 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4bQ9ES00 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4bQ9ES00 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4bQ9ES00 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Ube4bQ9ES00 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.21■□□□□ 0.34
Ube4bQ9ES00 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ube4bQ9ES00 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ube4bQ9ES00 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4bQ9ES00 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4bQ9ES00 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4bQ9ES00 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ube4bQ9ES00 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4bQ9ES00 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4bQ9ES00 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4bQ9ES00 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ube4bQ9ES00 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms