Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.82■□□□□ 0.6
Tlr9Q9EQU3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 Mir7071-201ENSMUST00000184847 69 ntBASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr9Q9EQU3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr9Q9EQU3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr9Q9EQU3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr9Q9EQU3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tlr9Q9EQU3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tlr9Q9EQU3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr9Q9EQU3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr9Q9EQU3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr9Q9EQU3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr9Q9EQU3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr9Q9EQU3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr9Q9EQU3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tlr9Q9EQU3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr9Q9EQU3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tlr9Q9EQU3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr9Q9EQU3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tlr9Q9EQU3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr9Q9EQU3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr9Q9EQU3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr9Q9EQU3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr9Q9EQU3 Gm8520-201ENSMUST00000186517 868 ntBASIC18.78■□□□□ 0.6
Tlr9Q9EQU3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr9Q9EQU3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr9Q9EQU3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr9Q9EQU3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr9Q9EQU3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr9Q9EQU3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tlr9Q9EQU3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tlr9Q9EQU3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tlr9Q9EQU3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tlr9Q9EQU3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tlr9Q9EQU3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tlr9Q9EQU3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr9Q9EQU3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tlr9Q9EQU3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr9Q9EQU3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr9Q9EQU3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr9Q9EQU3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.76■□□□□ 0.59
Tlr9Q9EQU3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr9Q9EQU3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr9Q9EQU3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms