Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne8Q9DC53 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Gm37179-201ENSMUST00000194862 823 ntBASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne8Q9DC53 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Gm26524-201ENSMUST00000192339 390 ntBASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne8Q9DC53 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.66■□□□□ 0.58
Cpne8Q9DC53 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne8Q9DC53 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Gm7290-201ENSMUST00000104990 617 ntBASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Gm12918-201ENSMUST00000120234 636 ntBASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Gm15710-201ENSMUST00000121821 636 ntBASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Gm5075-201ENSMUST00000196916 622 ntBASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms