Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rrp8Q9DB85 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rrp8Q9DB85 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rrp8Q9DB85 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rrp8Q9DB85 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rrp8Q9DB85 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Rrp8Q9DB85 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rrp8Q9DB85 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Rrp8Q9DB85 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rrp8Q9DB85 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rrp8Q9DB85 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rrp8Q9DB85 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rrp8Q9DB85 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rrp8Q9DB85 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rrp8Q9DB85 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rrp8Q9DB85 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rrp8Q9DB85 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Rrp8Q9DB85 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrp8Q9DB85 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Gm10013-201ENSMUST00000106074 672 ntBASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Mir2861-201ENSMUST00000175539 82 ntBASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Gm10517-202ENSMUST00000192970 758 ntBASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrp8Q9DB85 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Gm23634-201ENSMUST00000175071 91 ntBASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Iqck-206ENSMUST00000208658 2891 ntBASIC17.54■□□□□ 0.4
Rrp8Q9DB85 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rrp8Q9DB85 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rrp8Q9DB85 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rrp8Q9DB85 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
Rrp8Q9DB85 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rrp8Q9DB85 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.53■□□□□ 0.4
Rrp8Q9DB85 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.53■□□□□ 0.4
Rrp8Q9DB85 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.53■□□□□ 0.4
Rrp8Q9DB85 Gm45058-201ENSMUST00000205810 766 ntBASIC17.53■□□□□ 0.4
Rrp8Q9DB85 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rrp8Q9DB85 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rrp8Q9DB85 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrp8Q9DB85 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrp8Q9DB85 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrp8Q9DB85 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rrp8Q9DB85 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrp8Q9DB85 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrp8Q9DB85 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 271.4 ms