Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2aQ9DB34 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2aQ9DB34 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Gm37856-201ENSMUST00000191634 999 ntBASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2aQ9DB34 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Trmt13-210ENSMUST00000198454 880 ntBASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2aQ9DB34 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Chmp2aQ9DB34 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2aQ9DB34 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2aQ9DB34 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2aQ9DB34 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2aQ9DB34 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2aQ9DB34 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2aQ9DB34 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2aQ9DB34 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2aQ9DB34 Dio3-201ENSMUST00000097228 1449 ntBASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Flg-201ENSMUST00000050758 1488 ntBASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms