Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rita1Q9D1H0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.52■□□□□ 0.23
Rita1Q9D1H0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.52■□□□□ 0.23
Rita1Q9D1H0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rita1Q9D1H0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rita1Q9D1H0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rita1Q9D1H0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.52■□□□□ 0.23
Rita1Q9D1H0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rita1Q9D1H0 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.52■□□□□ 0.23
Rita1Q9D1H0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Mir1199-201ENSMUST00000117015 119 ntBASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rita1Q9D1H0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Mir6349-201ENSMUST00000184059 97 ntBASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rita1Q9D1H0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rita1Q9D1H0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.48■□□□□ 0.23
Rita1Q9D1H0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rita1Q9D1H0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rita1Q9D1H0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rita1Q9D1H0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rita1Q9D1H0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rita1Q9D1H0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rita1Q9D1H0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rita1Q9D1H0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rita1Q9D1H0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rita1Q9D1H0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rita1Q9D1H0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rita1Q9D1H0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rita1Q9D1H0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.47■□□□□ 0.23
Rita1Q9D1H0 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms