Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1aQ9D132 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1aQ9D132 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1aQ9D132 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk1aQ9D132 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upk1aQ9D132 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.02■□□□□ 0.32
Upk1aQ9D132 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upk1aQ9D132 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.02■□□□□ 0.32
Upk1aQ9D132 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upk1aQ9D132 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.02■□□□□ 0.32
Upk1aQ9D132 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk1aQ9D132 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Upk1aQ9D132 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Upk1aQ9D132 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Upk1aQ9D132 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.02■□□□□ 0.31
Upk1aQ9D132 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
Upk1aQ9D132 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Upk1aQ9D132 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.01■□□□□ 0.31
Upk1aQ9D132 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1aQ9D132 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Upk1aQ9D132 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Upk1aQ9D132 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk1aQ9D132 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk1aQ9D132 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17■□□□□ 0.31
Upk1aQ9D132 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk1aQ9D132 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk1aQ9D132 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Upk1aQ9D132 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17■□□□□ 0.31
Upk1aQ9D132 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Upk1aQ9D132 Gm13146-201ENSMUST00000118508 780 ntBASIC17■□□□□ 0.31
Upk1aQ9D132 Gm2011-201ENSMUST00000203124 1263 ntBASIC17■□□□□ 0.31
Upk1aQ9D132 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk1aQ9D132 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Upk1aQ9D132 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Upk1aQ9D132 Gm44544-201ENSMUST00000207052 1844 ntBASIC17■□□□□ 0.31
Upk1aQ9D132 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk1aQ9D132 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17■□□□□ 0.31
Upk1aQ9D132 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.99■□□□□ 0.31
Upk1aQ9D132 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Upk1aQ9D132 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk1aQ9D132 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms