Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mms19Q9D071 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mms19Q9D071 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mms19Q9D071 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Mms19Q9D071 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mms19Q9D071 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mms19Q9D071 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mms19Q9D071 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mms19Q9D071 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mms19Q9D071 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mms19Q9D071 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mms19Q9D071 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mms19Q9D071 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Mms19Q9D071 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mms19Q9D071 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mms19Q9D071 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mms19Q9D071 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mms19Q9D071 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mms19Q9D071 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mms19Q9D071 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mms19Q9D071 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mms19Q9D071 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mms19Q9D071 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.15■□□□□ 0.66
Mms19Q9D071 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mms19Q9D071 Zfp783-201ENSMUST00000095946 670 ntBASIC19.15■□□□□ 0.66
Mms19Q9D071 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mms19Q9D071 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Mms19Q9D071 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mms19Q9D071 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mms19Q9D071 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mms19Q9D071 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mms19Q9D071 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mms19Q9D071 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mms19Q9D071 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mms19Q9D071 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mms19Q9D071 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mms19Q9D071 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mms19Q9D071 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mms19Q9D071 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mms19Q9D071 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Mms19Q9D071 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Mms19Q9D071 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Mms19Q9D071 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Mms19Q9D071 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Mms19Q9D071 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mms19Q9D071 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mms19Q9D071 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mms19Q9D071 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Mms19Q9D071 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.14■□□□□ 0.65
Mms19Q9D071 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mms19Q9D071 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Mms19Q9D071 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mms19Q9D071 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mms19Q9D071 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.13■□□□□ 0.65
Mms19Q9D071 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.13■□□□□ 0.65
Mms19Q9D071 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mms19Q9D071 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mms19Q9D071 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mms19Q9D071 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mms19Q9D071 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.13■□□□□ 0.65
Mms19Q9D071 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Mms19Q9D071 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Mms19Q9D071 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Mms19Q9D071 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.12■□□□□ 0.65
Mms19Q9D071 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mms19Q9D071 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mms19Q9D071 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.12■□□□□ 0.65
Mms19Q9D071 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Mms19Q9D071 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.12■□□□□ 0.65
Mms19Q9D071 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mms19Q9D071 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mms19Q9D071 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Mms19Q9D071 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Mms19Q9D071 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mms19Q9D071 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mms19Q9D071 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mms19Q9D071 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.12■□□□□ 0.65
Mms19Q9D071 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mms19Q9D071 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mms19Q9D071 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mms19Q9D071 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mms19Q9D071 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Mms19Q9D071 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mms19Q9D071 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mms19Q9D071 Gm18666-201ENSMUST00000190039 958 ntBASIC19.11■□□□□ 0.65
Mms19Q9D071 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.11■□□□□ 0.65
Mms19Q9D071 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.11■□□□□ 0.65
Mms19Q9D071 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mms19Q9D071 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Mms19Q9D071 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mms19Q9D071 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mms19Q9D071 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mms19Q9D071 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.11■□□□□ 0.65
Mms19Q9D071 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mms19Q9D071 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mms19Q9D071 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mms19Q9D071 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mms19Q9D071 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mms19Q9D071 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mms19Q9D071 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms