Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnaseh2aQ9CWY8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnaseh2aQ9CWY8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.47■■□□□ 1.03
Rnaseh2aQ9CWY8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnaseh2aQ9CWY8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.47■■□□□ 1.03
Rnaseh2aQ9CWY8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnaseh2aQ9CWY8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnaseh2aQ9CWY8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnaseh2aQ9CWY8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnaseh2aQ9CWY8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnaseh2aQ9CWY8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnaseh2aQ9CWY8 Gm24841-201ENSMUST00000158676 357 ntBASIC21.45■■□□□ 1.02
Rnaseh2aQ9CWY8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnaseh2aQ9CWY8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC21.45■■□□□ 1.02
Rnaseh2aQ9CWY8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.45■■□□□ 1.02
Rnaseh2aQ9CWY8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Rnaseh2aQ9CWY8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnaseh2aQ9CWY8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnaseh2aQ9CWY8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnaseh2aQ9CWY8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
Rnaseh2aQ9CWY8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnaseh2aQ9CWY8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Rnaseh2aQ9CWY8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnaseh2aQ9CWY8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnaseh2aQ9CWY8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC21.44■■□□□ 1.02
Rnaseh2aQ9CWY8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnaseh2aQ9CWY8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Rnaseh2aQ9CWY8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnaseh2aQ9CWY8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.44■■□□□ 1.02
Rnaseh2aQ9CWY8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnaseh2aQ9CWY8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rnaseh2aQ9CWY8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnaseh2aQ9CWY8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnaseh2aQ9CWY8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rnaseh2aQ9CWY8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.43■■□□□ 1.02
Rnaseh2aQ9CWY8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnaseh2aQ9CWY8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnaseh2aQ9CWY8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rnaseh2aQ9CWY8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnaseh2aQ9CWY8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Rnaseh2aQ9CWY8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rnaseh2aQ9CWY8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
Rnaseh2aQ9CWY8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rnaseh2aQ9CWY8 Gm7063-201ENSMUST00000186840 981 ntBASIC21.42■■□□□ 1.02
Rnaseh2aQ9CWY8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnaseh2aQ9CWY8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnaseh2aQ9CWY8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnaseh2aQ9CWY8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Rnaseh2aQ9CWY8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnaseh2aQ9CWY8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnaseh2aQ9CWY8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnaseh2aQ9CWY8 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.41■■□□□ 1.02
Rnaseh2aQ9CWY8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rnaseh2aQ9CWY8 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.41■■□□□ 1.02
Rnaseh2aQ9CWY8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.41■■□□□ 1.02
Rnaseh2aQ9CWY8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rnaseh2aQ9CWY8 Gm10566-201ENSMUST00000086739 996 ntBASIC21.41■■□□□ 1.02
Rnaseh2aQ9CWY8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
Rnaseh2aQ9CWY8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnaseh2aQ9CWY8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Rnaseh2aQ9CWY8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnaseh2aQ9CWY8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.4■■□□□ 1.02
Rnaseh2aQ9CWY8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.4■■□□□ 1.02
Rnaseh2aQ9CWY8 Gm10052-201ENSMUST00000168019 960 ntBASIC21.4■■□□□ 1.02
Rnaseh2aQ9CWY8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnaseh2aQ9CWY8 Gm7729-201ENSMUST00000050143 801 ntBASIC21.4■■□□□ 1.02
Rnaseh2aQ9CWY8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnaseh2aQ9CWY8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Rnaseh2aQ9CWY8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rnaseh2aQ9CWY8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.4■■□□□ 1.02
Rnaseh2aQ9CWY8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnaseh2aQ9CWY8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rnaseh2aQ9CWY8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Rnaseh2aQ9CWY8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Rnaseh2aQ9CWY8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC21.39■■□□□ 1.01
Rnaseh2aQ9CWY8 Gm37722-201ENSMUST00000193757 208 ntBASIC21.39■■□□□ 1.01
Rnaseh2aQ9CWY8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnaseh2aQ9CWY8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnaseh2aQ9CWY8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnaseh2aQ9CWY8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnaseh2aQ9CWY8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnaseh2aQ9CWY8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnaseh2aQ9CWY8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Rnaseh2aQ9CWY8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms