Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Gm10653-202ENSMUST00000139570 835 ntBASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf135Q9CWS1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf135Q9CWS1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.64■□□□□ 0.57
Rnf135Q9CWS1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf135Q9CWS1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Rnf135Q9CWS1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf135Q9CWS1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.64■□□□□ 0.57
Rnf135Q9CWS1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf135Q9CWS1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf135Q9CWS1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rnf135Q9CWS1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.64■□□□□ 0.57
Rnf135Q9CWS1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf135Q9CWS1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Gm22325-201ENSMUST00000158904 308 ntBASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Gm4968-201ENSMUST00000071458 858 ntBASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf135Q9CWS1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf135Q9CWS1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf135Q9CWS1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf135Q9CWS1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf135Q9CWS1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Rnf135Q9CWS1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf135Q9CWS1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf135Q9CWS1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf135Q9CWS1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf135Q9CWS1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf135Q9CWS1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rnf135Q9CWS1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf135Q9CWS1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf135Q9CWS1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf135Q9CWS1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.6■□□□□ 0.57
Rnf135Q9CWS1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.6■□□□□ 0.57
Rnf135Q9CWS1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf135Q9CWS1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf135Q9CWS1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf135Q9CWS1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf135Q9CWS1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf135Q9CWS1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf135Q9CWS1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Rnf135Q9CWS1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf135Q9CWS1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms