Protein–RNA interactions for Protein: Q9CTH6

Fcf1, rRNA-processing protein FCF1 homolog, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fcf1Q9CTH6 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.04■□□□□ 0.48
Fcf1Q9CTH6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fcf1Q9CTH6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Fcf1Q9CTH6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fcf1Q9CTH6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.04■□□□□ 0.48
Fcf1Q9CTH6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.04■□□□□ 0.48
Fcf1Q9CTH6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Fcf1Q9CTH6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
Fcf1Q9CTH6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fcf1Q9CTH6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.04■□□□□ 0.48
Fcf1Q9CTH6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fcf1Q9CTH6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Fcf1Q9CTH6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Fcf1Q9CTH6 Gm42545-201ENSMUST00000202755 922 ntBASIC18.03■□□□□ 0.48
Fcf1Q9CTH6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Fcf1Q9CTH6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Fcf1Q9CTH6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Fcf1Q9CTH6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Fcf1Q9CTH6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Fcf1Q9CTH6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.03■□□□□ 0.48
Fcf1Q9CTH6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Fcf1Q9CTH6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Fcf1Q9CTH6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.02■□□□□ 0.48
Fcf1Q9CTH6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fcf1Q9CTH6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Fcf1Q9CTH6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.02■□□□□ 0.48
Fcf1Q9CTH6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fcf1Q9CTH6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.02■□□□□ 0.48
Fcf1Q9CTH6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.02■□□□□ 0.48
Fcf1Q9CTH6 Gm18025-201ENSMUST00000221733 862 ntBASIC18.02■□□□□ 0.48
Fcf1Q9CTH6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fcf1Q9CTH6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Fcf1Q9CTH6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Fcf1Q9CTH6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Fcf1Q9CTH6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Fcf1Q9CTH6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fcf1Q9CTH6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fcf1Q9CTH6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fcf1Q9CTH6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Fcf1Q9CTH6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Fcf1Q9CTH6 Mir2861-201ENSMUST00000175539 82 ntBASIC18.01■□□□□ 0.47
Fcf1Q9CTH6 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.01■□□□□ 0.47
Fcf1Q9CTH6 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.01■□□□□ 0.47
Fcf1Q9CTH6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fcf1Q9CTH6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fcf1Q9CTH6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fcf1Q9CTH6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Fcf1Q9CTH6 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.01■□□□□ 0.47
Fcf1Q9CTH6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Fcf1Q9CTH6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Fcf1Q9CTH6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fcf1Q9CTH6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18■□□□□ 0.47
Fcf1Q9CTH6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18■□□□□ 0.47
Fcf1Q9CTH6 Arhgef33-211ENSMUST00000225658 473 ntBASIC18■□□□□ 0.47
Fcf1Q9CTH6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Fcf1Q9CTH6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fcf1Q9CTH6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Fcf1Q9CTH6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fcf1Q9CTH6 Gm10654-201ENSMUST00000098653 1633 ntBASIC18■□□□□ 0.47
Fcf1Q9CTH6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fcf1Q9CTH6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18■□□□□ 0.47
Fcf1Q9CTH6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18■□□□□ 0.47
Fcf1Q9CTH6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fcf1Q9CTH6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 Mir6349-201ENSMUST00000184059 97 ntBASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 Gm43183-201ENSMUST00000200632 547 ntBASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 Gm10252-201ENSMUST00000209541 832 ntBASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Fcf1Q9CTH6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fcf1Q9CTH6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fcf1Q9CTH6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fcf1Q9CTH6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Fcf1Q9CTH6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Fcf1Q9CTH6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Fcf1Q9CTH6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.97■□□□□ 0.47
Fcf1Q9CTH6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms