Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Lrrc40Q9CRC8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Lrrc40Q9CRC8 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.84■□□□□ 0.45
Lrrc40Q9CRC8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrrc40Q9CRC8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lrrc40Q9CRC8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.83■□□□□ 0.45
Lrrc40Q9CRC8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lrrc40Q9CRC8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.83■□□□□ 0.44
Lrrc40Q9CRC8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.83■□□□□ 0.44
Lrrc40Q9CRC8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrrc40Q9CRC8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.83■□□□□ 0.44
Lrrc40Q9CRC8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.83■□□□□ 0.44
Lrrc40Q9CRC8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrrc40Q9CRC8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrrc40Q9CRC8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrrc40Q9CRC8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lrrc40Q9CRC8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.83■□□□□ 0.44
Lrrc40Q9CRC8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrrc40Q9CRC8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lrrc40Q9CRC8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lrrc40Q9CRC8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrc40Q9CRC8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Gm27405-201ENSMUST00000184201 112 ntBASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrc40Q9CRC8 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrc40Q9CRC8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrc40Q9CRC8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrc40Q9CRC8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrc40Q9CRC8 Gm2399-201ENSMUST00000104944 225 ntBASIC17.78■□□□□ 0.44
Lrrc40Q9CRC8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrc40Q9CRC8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrc40Q9CRC8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrc40Q9CRC8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrc40Q9CRC8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrc40Q9CRC8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lrrc40Q9CRC8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lrrc40Q9CRC8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrc40Q9CRC8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrc40Q9CRC8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.78■□□□□ 0.44
Lrrc40Q9CRC8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrc40Q9CRC8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrc40Q9CRC8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms