Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Gm7153-201ENSMUST00000117092 455 ntBASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Gm9013-201ENSMUST00000132939 882 ntBASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldnd1Q9CQX5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cldnd1Q9CQX5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Gm7638-201ENSMUST00000121348 967 ntBASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldnd1Q9CQX5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cldnd1Q9CQX5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldnd1Q9CQX5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldnd1Q9CQX5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cldnd1Q9CQX5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.38■□□□□ 0.53
Cldnd1Q9CQX5 Gm18669-201ENSMUST00000216049 778 ntBASIC18.38■□□□□ 0.53
Cldnd1Q9CQX5 Gm7791-201ENSMUST00000219066 539 ntBASIC18.38■□□□□ 0.53
Cldnd1Q9CQX5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cldnd1Q9CQX5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldnd1Q9CQX5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cldnd1Q9CQX5 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.38■□□□□ 0.53
Cldnd1Q9CQX5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Gm44771-201ENSMUST00000206975 626 ntBASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldnd1Q9CQX5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Gm17808-201ENSMUST00000200859 894 ntBASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Cldnd1Q9CQX5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldnd1Q9CQX5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldnd1Q9CQX5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldnd1Q9CQX5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldnd1Q9CQX5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms