Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Gm37856-201ENSMUST00000191634 999 ntBASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg3Q9CQV4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg3Q9CQV4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg3Q9CQV4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg3Q9CQV4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg3Q9CQV4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg3Q9CQV4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.03■□□□□ 0.48
Retreg3Q9CQV4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg3Q9CQV4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg3Q9CQV4 Trmt13-210ENSMUST00000198454 880 ntBASIC18.03■□□□□ 0.48
Retreg3Q9CQV4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg3Q9CQV4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg3Q9CQV4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg3Q9CQV4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg3Q9CQV4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg3Q9CQV4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg3Q9CQV4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg3Q9CQV4 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.02■□□□□ 0.48
Retreg3Q9CQV4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg3Q9CQV4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.02■□□□□ 0.47
Retreg3Q9CQV4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retreg3Q9CQV4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retreg3Q9CQV4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg3Q9CQV4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.01■□□□□ 0.47
Retreg3Q9CQV4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg3Q9CQV4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg3Q9CQV4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.01■□□□□ 0.47
Retreg3Q9CQV4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Retreg3Q9CQV4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg3Q9CQV4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg3Q9CQV4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Retreg3Q9CQV4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg3Q9CQV4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg3Q9CQV4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18■□□□□ 0.47
Retreg3Q9CQV4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg3Q9CQV4 Gm45141-201ENSMUST00000206502 1888 ntBASIC18■□□□□ 0.47
Retreg3Q9CQV4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Retreg3Q9CQV4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg3Q9CQV4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg3Q9CQV4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Retreg3Q9CQV4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg3Q9CQV4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Retreg3Q9CQV4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.99■□□□□ 0.47
Retreg3Q9CQV4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.99■□□□□ 0.47
Retreg3Q9CQV4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg3Q9CQV4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Retreg3Q9CQV4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg3Q9CQV4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg3Q9CQV4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg3Q9CQV4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg3Q9CQV4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg3Q9CQV4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg3Q9CQV4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Retreg3Q9CQV4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg3Q9CQV4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg3Q9CQV4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg3Q9CQV4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.97■□□□□ 0.47
Retreg3Q9CQV4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.97■□□□□ 0.47
Retreg3Q9CQV4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg3Q9CQV4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Retreg3Q9CQV4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg3Q9CQV4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg3Q9CQV4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms