Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpa3Q9CQ71 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpa3Q9CQ71 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rpa3Q9CQ71 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rpa3Q9CQ71 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.96■□□□□ 0.63
Rpa3Q9CQ71 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.96■□□□□ 0.63
Rpa3Q9CQ71 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.96■□□□□ 0.63
Rpa3Q9CQ71 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpa3Q9CQ71 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpa3Q9CQ71 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rpa3Q9CQ71 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpa3Q9CQ71 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rpa3Q9CQ71 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rpa3Q9CQ71 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa3Q9CQ71 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa3Q9CQ71 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa3Q9CQ71 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa3Q9CQ71 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa3Q9CQ71 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa3Q9CQ71 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.95■□□□□ 0.62
Rpa3Q9CQ71 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa3Q9CQ71 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.95■□□□□ 0.62
Rpa3Q9CQ71 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.95■□□□□ 0.62
Rpa3Q9CQ71 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rpa3Q9CQ71 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa3Q9CQ71 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.94■□□□□ 0.62
Rpa3Q9CQ71 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Gm38285-201ENSMUST00000192928 922 ntBASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa3Q9CQ71 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Zfp783-201ENSMUST00000095946 670 ntBASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa3Q9CQ71 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Gm12896-201ENSMUST00000118430 226 ntBASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa3Q9CQ71 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpa3Q9CQ71 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpa3Q9CQ71 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms