Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim16Q99PP9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.54■□□□□ 0.4
Trim16Q99PP9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim16Q99PP9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim16Q99PP9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Gm6365-201ENSMUST00000054711 744 ntBASIC17.53■□□□□ 0.4
Trim16Q99PP9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trim16Q99PP9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim16Q99PP9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim16Q99PP9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim16Q99PP9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim16Q99PP9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim16Q99PP9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim16Q99PP9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim16Q99PP9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim16Q99PP9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim16Q99PP9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.52■□□□□ 0.4
Trim16Q99PP9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim16Q99PP9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim16Q99PP9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim16Q99PP9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim16Q99PP9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
Trim16Q99PP9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim16Q99PP9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim16Q99PP9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Gm12933-201ENSMUST00000120203 872 ntBASIC17.51■□□□□ 0.39
Trim16Q99PP9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim16Q99PP9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trim16Q99PP9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Gm7290-201ENSMUST00000104990 617 ntBASIC17.5■□□□□ 0.39
Trim16Q99PP9 Gm12918-201ENSMUST00000120234 636 ntBASIC17.5■□□□□ 0.39
Trim16Q99PP9 Gm15710-201ENSMUST00000121821 636 ntBASIC17.5■□□□□ 0.39
Trim16Q99PP9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Gm5075-201ENSMUST00000196916 622 ntBASIC17.5■□□□□ 0.39
Trim16Q99PP9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.5■□□□□ 0.39
Trim16Q99PP9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.5■□□□□ 0.39
Trim16Q99PP9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim16Q99PP9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms