Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh15Q99PJ1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Pcdh15Q99PJ1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.52■□□□□ 0.88
Pcdh15Q99PJ1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.52■□□□□ 0.88
Pcdh15Q99PJ1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh15Q99PJ1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Pcdh15Q99PJ1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Pcdh15Q99PJ1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdh15Q99PJ1 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.52■□□□□ 0.87
Pcdh15Q99PJ1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Gm5867-201ENSMUST00000063197 592 ntBASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh15Q99PJ1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh15Q99PJ1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh15Q99PJ1 Mir770-201ENSMUST00000103252 94 ntBASIC20.5■□□□□ 0.87
Pcdh15Q99PJ1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh15Q99PJ1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh15Q99PJ1 Mir3081-201ENSMUST00000175305 84 ntBASIC20.5■□□□□ 0.87
Pcdh15Q99PJ1 Gm37025-201ENSMUST00000195159 829 ntBASIC20.5■□□□□ 0.87
Pcdh15Q99PJ1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh15Q99PJ1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh15Q99PJ1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh15Q99PJ1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh15Q99PJ1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdh15Q99PJ1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
Pcdh15Q99PJ1 Il3ra-202ENSMUST00000223589 738 ntBASIC20.49■□□□□ 0.87
Pcdh15Q99PJ1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh15Q99PJ1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh15Q99PJ1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdh15Q99PJ1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh15Q99PJ1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh15Q99PJ1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh15Q99PJ1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh15Q99PJ1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdh15Q99PJ1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.48■□□□□ 0.87
Pcdh15Q99PJ1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Pcdh15Q99PJ1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh15Q99PJ1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 Gm37722-201ENSMUST00000193757 208 ntBASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh15Q99PJ1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh15Q99PJ1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh15Q99PJ1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh15Q99PJ1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh15Q99PJ1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh15Q99PJ1 Olfr129-201ENSMUST00000122318 993 ntBASIC20.45■□□□□ 0.86
Pcdh15Q99PJ1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh15Q99PJ1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdh15Q99PJ1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh15Q99PJ1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh15Q99PJ1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh15Q99PJ1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdh15Q99PJ1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdh15Q99PJ1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh15Q99PJ1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh15Q99PJ1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh15Q99PJ1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdh15Q99PJ1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh15Q99PJ1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Pcdh15Q99PJ1 Gm10418-201ENSMUST00000100943 576 ntBASIC20.44■□□□□ 0.86
Pcdh15Q99PJ1 Gm43514-201ENSMUST00000198852 424 ntBASIC20.44■□□□□ 0.86
Pcdh15Q99PJ1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.44■□□□□ 0.86
Pcdh15Q99PJ1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh15Q99PJ1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh15Q99PJ1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh15Q99PJ1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh15Q99PJ1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdh15Q99PJ1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh15Q99PJ1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.43■□□□□ 0.86
Pcdh15Q99PJ1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdh15Q99PJ1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh15Q99PJ1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh15Q99PJ1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh15Q99PJ1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh15Q99PJ1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms