Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh23Q99PF4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdh23Q99PF4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.38■□□□□ 0.53
Cdh23Q99PF4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cdh23Q99PF4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh23Q99PF4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdh23Q99PF4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh23Q99PF4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh23Q99PF4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh23Q99PF4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh23Q99PF4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh23Q99PF4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdh23Q99PF4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh23Q99PF4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdh23Q99PF4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh23Q99PF4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh23Q99PF4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Cdh23Q99PF4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh23Q99PF4 Mir2861-201ENSMUST00000175539 82 ntBASIC18.37■□□□□ 0.53
Cdh23Q99PF4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.37■□□□□ 0.53
Cdh23Q99PF4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh23Q99PF4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh23Q99PF4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh23Q99PF4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh23Q99PF4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh23Q99PF4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.37■□□□□ 0.53
Cdh23Q99PF4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh23Q99PF4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh23Q99PF4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh23Q99PF4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh23Q99PF4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh23Q99PF4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh23Q99PF4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh23Q99PF4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cdh23Q99PF4 Gm43347-201ENSMUST00000200226 580 ntBASIC18.36■□□□□ 0.53
Cdh23Q99PF4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh23Q99PF4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh23Q99PF4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh23Q99PF4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Gm15794-201ENSMUST00000120182 631 ntBASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Gm27459-201ENSMUST00000184860 107 ntBASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh23Q99PF4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh23Q99PF4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh23Q99PF4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Cdh23Q99PF4 Gm13474-201ENSMUST00000122466 815 ntBASIC18.33■□□□□ 0.53
Cdh23Q99PF4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Cdh23Q99PF4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh23Q99PF4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh23Q99PF4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.53
Cdh23Q99PF4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
Cdh23Q99PF4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Cdh23Q99PF4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh23Q99PF4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh23Q99PF4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh23Q99PF4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh23Q99PF4 Gm28659-201ENSMUST00000188013 759 ntBASIC18.33■□□□□ 0.52
Cdh23Q99PF4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh23Q99PF4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh23Q99PF4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh23Q99PF4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cdh23Q99PF4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh23Q99PF4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh23Q99PF4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cdh23Q99PF4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cdh23Q99PF4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh23Q99PF4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh23Q99PF4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cdh23Q99PF4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
Cdh23Q99PF4 Mir1668-201ENSMUST00000184114 107 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms