Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Gm29791-202ENSMUST00000207888 369 ntBASIC18.69■□□□□ 0.58
Tpgs1Q99MS8 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.69■□□□□ 0.58
Tpgs1Q99MS8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpgs1Q99MS8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpgs1Q99MS8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpgs1Q99MS8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.69■□□□□ 0.58
Tpgs1Q99MS8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpgs1Q99MS8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.69■□□□□ 0.58
Tpgs1Q99MS8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpgs1Q99MS8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Gm22240-201ENSMUST00000175225 82 ntBASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpgs1Q99MS8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpgs1Q99MS8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpgs1Q99MS8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Idnk-204ENSMUST00000226010 1898 ntBASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Gm37292-201ENSMUST00000192062 758 ntBASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Gm42545-201ENSMUST00000202755 922 ntBASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpgs1Q99MS8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Tpgs1Q99MS8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tpgs1Q99MS8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tpgs1Q99MS8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpgs1Q99MS8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpgs1Q99MS8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpgs1Q99MS8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.64■□□□□ 0.57
Tpgs1Q99MS8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpgs1Q99MS8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Tpgs1Q99MS8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpgs1Q99MS8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Tpgs1Q99MS8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpgs1Q99MS8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpgs1Q99MS8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.63■□□□□ 0.57
Tpgs1Q99MS8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tpgs1Q99MS8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tpgs1Q99MS8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tpgs1Q99MS8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms