Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Rnf111Q99ML9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf111Q99ML9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rnf111Q99ML9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf111Q99ML9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf111Q99ML9 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.39■□□□□ 0.37
Rnf111Q99ML9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf111Q99ML9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.39■□□□□ 0.37
Rnf111Q99ML9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.39■□□□□ 0.37
Rnf111Q99ML9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.39■□□□□ 0.37
Rnf111Q99ML9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rnf111Q99ML9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Rnf111Q99ML9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf111Q99ML9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf111Q99ML9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf111Q99ML9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf111Q99ML9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf111Q99ML9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf111Q99ML9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf111Q99ML9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf111Q99ML9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Gm27405-201ENSMUST00000184201 112 ntBASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms