Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clp1Q99LI9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.99■□□□□ 0.63
Clp1Q99LI9 Gm16061-201ENSMUST00000122167 857 ntBASIC18.99■□□□□ 0.63
Clp1Q99LI9 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.99■□□□□ 0.63
Clp1Q99LI9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.99■□□□□ 0.63
Clp1Q99LI9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.99■□□□□ 0.63
Clp1Q99LI9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.99■□□□□ 0.63
Clp1Q99LI9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clp1Q99LI9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clp1Q99LI9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clp1Q99LI9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.99■□□□□ 0.63
Clp1Q99LI9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clp1Q99LI9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clp1Q99LI9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clp1Q99LI9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Clp1Q99LI9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clp1Q99LI9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clp1Q99LI9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.98■□□□□ 0.63
Clp1Q99LI9 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.98■□□□□ 0.63
Clp1Q99LI9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clp1Q99LI9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clp1Q99LI9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clp1Q99LI9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clp1Q99LI9 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.98■□□□□ 0.63
Clp1Q99LI9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clp1Q99LI9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Clp1Q99LI9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.97■□□□□ 0.63
Clp1Q99LI9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clp1Q99LI9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clp1Q99LI9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Clp1Q99LI9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.96■□□□□ 0.63
Clp1Q99LI9 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.96■□□□□ 0.63
Clp1Q99LI9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clp1Q99LI9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clp1Q99LI9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.96■□□□□ 0.63
Clp1Q99LI9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clp1Q99LI9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.95■□□□□ 0.62
Clp1Q99LI9 Gm17661-201ENSMUST00000170317 270 ntBASIC18.95■□□□□ 0.62
Clp1Q99LI9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clp1Q99LI9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.95■□□□□ 0.62
Clp1Q99LI9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clp1Q99LI9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Clp1Q99LI9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clp1Q99LI9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Clp1Q99LI9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clp1Q99LI9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.94■□□□□ 0.62
Clp1Q99LI9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.94■□□□□ 0.62
Clp1Q99LI9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
Clp1Q99LI9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clp1Q99LI9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clp1Q99LI9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Clp1Q99LI9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clp1Q99LI9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clp1Q99LI9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clp1Q99LI9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clp1Q99LI9 Gm13474-201ENSMUST00000122466 815 ntBASIC18.93■□□□□ 0.62
Clp1Q99LI9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clp1Q99LI9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clp1Q99LI9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clp1Q99LI9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clp1Q99LI9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clp1Q99LI9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clp1Q99LI9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clp1Q99LI9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clp1Q99LI9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clp1Q99LI9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clp1Q99LI9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clp1Q99LI9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clp1Q99LI9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clp1Q99LI9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Clp1Q99LI9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.92■□□□□ 0.62
Clp1Q99LI9 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.91■□□□□ 0.62
Clp1Q99LI9 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.91■□□□□ 0.62
Clp1Q99LI9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clp1Q99LI9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clp1Q99LI9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clp1Q99LI9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clp1Q99LI9 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.91■□□□□ 0.62
Clp1Q99LI9 Gm7284-201ENSMUST00000131667 944 ntBASIC18.91■□□□□ 0.62
Clp1Q99LI9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clp1Q99LI9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clp1Q99LI9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clp1Q99LI9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clp1Q99LI9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms