Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 Gm6576-201ENSMUST00000169678 883 ntBASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 Gm18025-201ENSMUST00000221733 862 ntBASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lysmd3Q99LE3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lysmd3Q99LE3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lysmd3Q99LE3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.58■□□□□ 0.56
Lysmd3Q99LE3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lysmd3Q99LE3 Gm42545-201ENSMUST00000202755 922 ntBASIC18.58■□□□□ 0.56
Lysmd3Q99LE3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.58■□□□□ 0.56
Lysmd3Q99LE3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Lysmd3Q99LE3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lysmd3Q99LE3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lysmd3Q99LE3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lysmd3Q99LE3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lysmd3Q99LE3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Lysmd3Q99LE3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.57■□□□□ 0.56
Lysmd3Q99LE3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.57■□□□□ 0.56
Lysmd3Q99LE3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lysmd3Q99LE3 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.57■□□□□ 0.56
Lysmd3Q99LE3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lysmd3Q99LE3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Lysmd3Q99LE3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Lysmd3Q99LE3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lysmd3Q99LE3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lysmd3Q99LE3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.57■□□□□ 0.56
Lysmd3Q99LE3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Lysmd3Q99LE3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.57■□□□□ 0.56
Lysmd3Q99LE3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lysmd3Q99LE3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd3Q99LE3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Lysmd3Q99LE3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd3Q99LE3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd3Q99LE3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd3Q99LE3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.56■□□□□ 0.56
Lysmd3Q99LE3 Mir6349-201ENSMUST00000184059 97 ntBASIC18.56■□□□□ 0.56
Lysmd3Q99LE3 Gm43183-201ENSMUST00000200632 547 ntBASIC18.56■□□□□ 0.56
Lysmd3Q99LE3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.56■□□□□ 0.56
Lysmd3Q99LE3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd3Q99LE3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd3Q99LE3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd3Q99LE3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd3Q99LE3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Mir2861-201ENSMUST00000175539 82 ntBASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Grk6-206ENSMUST00000224995 2971 ntBASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Tgds-204ENSMUST00000228543 1594 ntBASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd3Q99LE3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Mir1199-201ENSMUST00000117015 119 ntBASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd3Q99LE3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.53■□□□□ 0.56
Lysmd3Q99LE3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms